Week 5 HW: Protein Design Part II :: 2026a-alayah-hineshttps://pages.htgaa.org/2026a/alayah-hines/homework/week-05-hw-protein-design-part-ii/index.htmlHW5 Part A Part 1: Generate Binders with PepMLM I started by getting the SOD1 sequence from UniProt: MATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIGIAQ Then I added the A4V mutation which changed it to: MATKVVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIGIAQHugoen