Homework

Weekly homework submissions:

  • Week 1 HW: Principles and Practices

    1. Describe a biological engineering application or tool you want to develop and why One biological engineering application I would like to develop at HTGAA is an active dressing or biomaterial for treating superficial wounds that incorporates bromelain, a proteolytic enzyme derived from pineapple. This biomaterial would primarily promote gentle enzymatic debridement, reduce local inflammation, and support the healing process, using a naturally occurring and potentially accessible compound. The interest in this application stems from the fact that bromelain has demonstrated anti-inflammatory and proteolytic properties, but its direct, uncontrolled use can cause irritation or tissue damage. Therefore, integrating this compound into a controlled biomaterial would maximize therapeutic benefits and minimize potential risks, especially in primary healthcare settings or areas with limited access to healthcare facilities.
  • Week 2 HW: DNA Read, Write, & Edit

    Part 1: Benchling & In-silico Gel Art Simulate Restriction Enzyme Digestion with the following Enzymes: EcoRI HindIII BamHI KpnI EcoRV SacI SalI Create a pattern/image in the style of Paul Vanouse’s Latent Figure Protocol artworks. Part 3: DNA Design Challenge 3.1. Choose your protein.

  • Week 3 HW: / Lab Automation

    Python Script for Opentrons Artwork Generate an artistic design using the GUI at opentrons-art.rcdonovan.com. Using the coordinates from the GUI, follow the instructions in the HTGAA26 Opentrons Colab to write your own Python script which draws your design using the Opentrons. View the Python script here