Week 5 HW: Protein Design II

Part A: SOD1 Binder Peptide Design

Part 1: Generating Binders with PepMLM

Part 2: Evaluating Binders with AlphaFold3

Part 3: Evaluate Properties of Generated Peptides in the PeptiVerse

Part 4: Generate Optimized Peptides with moPPIt

Part B: BRD4 Drug Discovery Platform Tutorial

Part C: Final L Protein Mutants