<?xml version="1.0" encoding="utf-8" standalone="yes"?><rss version="2.0" xmlns:atom="http://www.w3.org/2005/Atom"><channel><title>Week 5 HW: Protein Design Part II :: 2026a-sara-gaviria-escobar</title><link>https://pages.htgaa.org/2026a/sara-gaviria-escobar/homework/week-05-hw-protein-design-part-ii/index.html</link><description>Part A: SOD1 Binder Peptide Design Part 1: Generate Binders with PepMLM To get the human SOD1 sequence, I went to UniProt. The ID for this protein is P00441 and the sequence is the following:
MATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIGIAQ
Now, if the mutation is A4V, that means that in position 4 there’s a change from alanine to valine. The mutated sequence is then the following:</description><generator>Hugo</generator><language>en</language><atom:link href="https://pages.htgaa.org/2026a/sara-gaviria-escobar/homework/week-05-hw-protein-design-part-ii/index.xml" rel="self" type="application/rss+xml"/></channel></rss>