<?xml version="1.0" encoding="utf-8" standalone="yes"?><rss version="2.0" xmlns:atom="http://www.w3.org/2005/Atom"><channel><title>Week 5 HW: Protein Design Part II :: 2026a-xavier-lewis-palmer</title><link>https://pages.htgaa.org/2026a/xavier-lewis-palmer/homework/week-05-hw-protein-design-part-ii/index.html</link><description>This week’s homework was divided into 3 parts.
Part A involved SOD1 Binder Peptide Design. That was broken into 3 parts: Part 1: Part 1: Generate Binders with PepMLM
A) Begin by retrieving the human SOD1 sequence from UniProt (P00441) and introducing the A4V mutation. Done B) Using the PepMLM Colab linked from the HuggingFace PepMLM-650M model card: Done C) Generate four peptides of length 12 amino acids conditioned on the mutant SOD1 sequence.</description><generator>Hugo</generator><language>en</language><atom:link href="https://pages.htgaa.org/2026a/xavier-lewis-palmer/homework/week-05-hw-protein-design-part-ii/index.xml" rel="self" type="application/rss+xml"/></channel></rss>